Sinaimeri, Blerina
A family of tree-based generators for bubbles in directed graphs
2021 Acuña, Vicente; Soares de Lima, Leandro Ishi; Italiano, Giuseppe Francesco; Pepè Sciarria, Luca; Sagot, Marie-France; Sinaimeri, Blerina
A general framework for enumerating equivalence classes of solutions
2021 Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
A General Framework for Enumerating Equivalence Classes of Solutions
2023 Wang, Yishu; Mary, Arnaud; Sagot, MARIE-FRANCE; Sinaimeri, Blerina
Algorithms for the quantitative Lock/Key model of cytoplasmic incompatibility
2020 Calamoneri, T.; Gastaldello, M.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
All graphs with at most seven vertices are Pairwise compatibility graphs
2013 Calamoneri, Tiziana; D., Frascaria; Sinaimeri, Blerina
Capybara: Equivalence ClAss enumeration of coPhylogenY event-BAsed ReconciliAtions
2020 Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
Co-divergence and tree topology
2019 Calamoneri, T.; Monti, A.; Sinaimeri, Blerina
Compressed weighted de Bruijn graphs
2021 Italiano, Giuseppe Francesco; Prezza, Nicola; Sinaimeri, Blerina; Venturini, R.
Cophylogeny Reconstruction Allowing for Multiple Associations Through Approximate Bayesian Computation
2023 Sinaimeri, Blerina; Urbini, Laura; Sagot, MARIE-FRANCE; Matias, Catherine
Cophylogeny reconstruction via an approximate bayesian computation
2015 Baudet, C.; Donati, B.; Sinaimeri, Blerina; Crescenzi, P.; Gautier, C.; Matias, C.; Sagot, M. -F.
Efficiently sparse listing of classes of optimal cophylogeny reconciliations
2022 Wang, Yishu; Mary, Arnaud; Sagot, Marie-France; Sinaimeri, Blerina
EUCALYPT: Efficient tree reconciliation enumerator
2015 Donati, B.; Baudet, C.; Sinaimeri, Blerina; Crescenzi, P.; Sagot, M. -F.
Exploring and visualizing spaces of tree reconciliations
2019 Huber, K. T.; Moulton, V.; Sagot, M. -F.; Sinaimeri, Blerina
Exploring pairwise compatibility graphs
2013 Calamoneri, Tiziana; Montefusco, Eugenio; Petreschi, Rossella; Sinaimeri, Blerina
Exploring the Robustness of the Parsimonious Reconciliation Method in Host-Symbiont Cophylogeny
2019 Urbini, L.; Sinaimeri, Blerina; Matias, C.; Sagot, M. -F.
From Stars to Diamonds: Counting and Listing Almost Complete Subgraphs in Large Networks
2024 Finocchi, Irene; Leon Garcia, Renan; Sinaimeri, Blerina
Geometric medians in reconciliation spaces of phylogenetic trees
2018 Huber, K. T.; Moulton, V.; Sagot, M. -F.; Sinaimeri, Blerina
L(2,1)-labeling of oriented planar graphs
2013 Calamoneri, Tiziana; Sinaimeri, Blerina
Making sense of a cophylogeny output: Efficient listing of representative reconciliations
2021 Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
Navigating in a sea of repeats in RNA-seq without drowning
2014 Sacomoto, G.; Sinaimeri, Blerina; Marchet, C.; Miele, V.; Sagot, M. -F.; Lacroix, V.
| Titolo | Data di pubblicazione | Autore(i) | File |
|---|---|---|---|
| A family of tree-based generators for bubbles in directed graphs | 2021 | Acuña, Vicente; Soares de Lima, Leandro Ishi; Italiano, Giuseppe Francesco; Pepè Sciarria, Luca; Sagot, Marie-France; Sinaimeri, Blerina | |
| A general framework for enumerating equivalence classes of solutions | 2021 | Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina | |
| A General Framework for Enumerating Equivalence Classes of Solutions | 2023 | Wang, Yishu; Mary, Arnaud; Sagot, MARIE-FRANCE; Sinaimeri, Blerina | |
| Algorithms for the quantitative Lock/Key model of cytoplasmic incompatibility | 2020 | Calamoneri, T.; Gastaldello, M.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina | |
| All graphs with at most seven vertices are Pairwise compatibility graphs | 2013 | Calamoneri, Tiziana; D., Frascaria; Sinaimeri, Blerina | |
| Capybara: Equivalence ClAss enumeration of coPhylogenY event-BAsed ReconciliAtions | 2020 | Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina | |
| Co-divergence and tree topology | 2019 | Calamoneri, T.; Monti, A.; Sinaimeri, Blerina | |
| Compressed weighted de Bruijn graphs | 2021 | Italiano, Giuseppe Francesco; Prezza, Nicola; Sinaimeri, Blerina; Venturini, R. | |
| Cophylogeny Reconstruction Allowing for Multiple Associations Through Approximate Bayesian Computation | 2023 | Sinaimeri, Blerina; Urbini, Laura; Sagot, MARIE-FRANCE; Matias, Catherine | |
| Cophylogeny reconstruction via an approximate bayesian computation | 2015 | Baudet, C.; Donati, B.; Sinaimeri, Blerina; Crescenzi, P.; Gautier, C.; Matias, C.; Sagot, M. -F. | |
| Efficiently sparse listing of classes of optimal cophylogeny reconciliations | 2022 | Wang, Yishu; Mary, Arnaud; Sagot, Marie-France; Sinaimeri, Blerina | |
| EUCALYPT: Efficient tree reconciliation enumerator | 2015 | Donati, B.; Baudet, C.; Sinaimeri, Blerina; Crescenzi, P.; Sagot, M. -F. | |
| Exploring and visualizing spaces of tree reconciliations | 2019 | Huber, K. T.; Moulton, V.; Sagot, M. -F.; Sinaimeri, Blerina | |
| Exploring pairwise compatibility graphs | 2013 | Calamoneri, Tiziana; Montefusco, Eugenio; Petreschi, Rossella; Sinaimeri, Blerina | |
| Exploring the Robustness of the Parsimonious Reconciliation Method in Host-Symbiont Cophylogeny | 2019 | Urbini, L.; Sinaimeri, Blerina; Matias, C.; Sagot, M. -F. | |
| From Stars to Diamonds: Counting and Listing Almost Complete Subgraphs in Large Networks | 2024 | Finocchi, Irene; Leon Garcia, Renan; Sinaimeri, Blerina | |
| Geometric medians in reconciliation spaces of phylogenetic trees | 2018 | Huber, K. T.; Moulton, V.; Sagot, M. -F.; Sinaimeri, Blerina | |
| L(2,1)-labeling of oriented planar graphs | 2013 | Calamoneri, Tiziana; Sinaimeri, Blerina | |
| Making sense of a cophylogeny output: Efficient listing of representative reconciliations | 2021 | Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina | |
| Navigating in a sea of repeats in RNA-seq without drowning | 2014 | Sacomoto, G.; Sinaimeri, Blerina; Marchet, C.; Miele, V.; Sagot, M. -F.; Lacroix, V. |