Sinaimeri, Blerina

Sinaimeri, Blerina  

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A family of tree-based generators for bubbles in directed graphs 2021 Acuña, Vicente; Soares de Lima, Leandro Ishi; Italiano, Giuseppe Francesco; Pepè Sciarria, Luca; Sagot, Marie-France; Sinaimeri, Blerina
A general framework for enumerating equivalence classes of solutions 2021 Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
A General Framework for Enumerating Equivalence Classes of Solutions 2023 Wang, Yishu; Mary, Arnaud; Sagot, MARIE-FRANCE; Sinaimeri, Blerina
Algorithms for the quantitative Lock/Key model of cytoplasmic incompatibility 2020 Calamoneri, T.; Gastaldello, M.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
All graphs with at most seven vertices are Pairwise compatibility graphs 2013 Calamoneri, Tiziana; D., Frascaria; Sinaimeri, Blerina
Capybara: Equivalence ClAss enumeration of coPhylogenY event-BAsed ReconciliAtions 2020 Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
Co-divergence and tree topology 2019 Calamoneri, T.; Monti, A.; Sinaimeri, Blerina
Compressed weighted de Bruijn graphs 2021 Italiano, Giuseppe Francesco; Prezza, Nicola; Sinaimeri, Blerina; Venturini, R.
Cophylogeny Reconstruction Allowing for Multiple Associations Through Approximate Bayesian Computation 2023 Sinaimeri, Blerina; Urbini, Laura; Sagot, MARIE-FRANCE; Matias, Catherine
Cophylogeny reconstruction via an approximate bayesian computation 2015 Baudet, C.; Donati, B.; Sinaimeri, Blerina; Crescenzi, P.; Gautier, C.; Matias, C.; Sagot, M. -F.
Efficiently sparse listing of classes of optimal cophylogeny reconciliations 2022 Wang, Yishu; Mary, Arnaud; Sagot, Marie-France; Sinaimeri, Blerina
EUCALYPT: Efficient tree reconciliation enumerator 2015 Donati, B.; Baudet, C.; Sinaimeri, Blerina; Crescenzi, P.; Sagot, M. -F.
Exploring and visualizing spaces of tree reconciliations 2019 Huber, K. T.; Moulton, V.; Sagot, M. -F.; Sinaimeri, Blerina
Exploring pairwise compatibility graphs 2013 Calamoneri, Tiziana; Montefusco, Eugenio; Petreschi, Rossella; Sinaimeri, Blerina
Exploring the Robustness of the Parsimonious Reconciliation Method in Host-Symbiont Cophylogeny 2019 Urbini, L.; Sinaimeri, Blerina; Matias, C.; Sagot, M. -F.
From Stars to Diamonds: Counting and Listing Almost Complete Subgraphs in Large Networks 2024 Finocchi, Irene; Leon Garcia, Renan; Sinaimeri, Blerina
Geometric medians in reconciliation spaces of phylogenetic trees 2018 Huber, K. T.; Moulton, V.; Sagot, M. -F.; Sinaimeri, Blerina
L(2,1)-labeling of oriented planar graphs 2013 Calamoneri, Tiziana; Sinaimeri, Blerina
Making sense of a cophylogeny output: Efficient listing of representative reconciliations 2021 Wang, Y.; Mary, A.; Sagot, M. -F.; Sinaimeri, Blerina
Navigating in a sea of repeats in RNA-seq without drowning 2014 Sacomoto, G.; Sinaimeri, Blerina; Marchet, C.; Miele, V.; Sagot, M. -F.; Lacroix, V.